Import Genome Assembly Stats File — read_assemblystats • biomartr
Description: This function reads an organism specific Genome Assembly Stats file that was retrieved with getAssemblyStats.

# Import Genome Assembly Stats File

Source: `R/read_assemblystats.R`
`read_assemblystats.Rd`

This function reads an organism specific Genome Assembly Stats file that was retrieved with `getAssemblyStats`.

    read_assemblystats(file, type = "raw")

## Arguments

file

  a character string specifying the path to the file storing the Genome Assembly Stats file.

type

  a tibble object, either `type = "raw"` to import the entire genome assembly stats file or `type = "stats"` to import overall statistics including all chromosomes, mitochondria and plastids.

## Details

This function takes a string specifying the path to the Genome Assembly Stats file of interest (e.g. the path returned by `getAssemblyStats`) and imports it.

## See also

`getAssemblyStats`, `read_genome`, `read_proteome`, `read_cds`, `read_gff`

## Author

Hajk-Georg Drost