Retrieve the assembly_summary.txt file from NCBI genbank metagenomes — getMetaGenomeSummary • biomartr
Description: Retrieval function of the assembly_summary.txt file from NCBI genbank metagenomes. This files stores all available metagenome projects on NCBI Genbank.

# Retrieve the assembly_summary.txt file from NCBI genbank metagenomes

Source: `R/getMetaGenomeSummary.R`
`getMetaGenomeSummary.Rd`

Retrieval function of the assembly_summary.txt file from NCBI genbank metagenomes. This files stores all available metagenome projects on NCBI Genbank.

    getMetaGenomeSummary(
      local_file = file.path(cachedir(), "assembly_summary_metagenomes_genbank.txt")
    )

## Arguments

local_file

  where to store this backend file, default: file.path(cachedir(), "assembly_summary_metagenomes_genbank.txt")

## See also

`getKingdomAssemblySummary`, `getSummaryFile`

## Author

Hajk-Georg Drost

## Examples

    if (FALSE) {
    meta.summary <- getMetaGenomeSummary()
    meta.summary
    }