RSGISLib Image Calculations
===============================

Band & Image Maths
---------------------

.. autofunction:: rsgislib.imagecalc.band_math
.. autofunction:: rsgislib.imagecalc.image_math
.. autofunction:: rsgislib.imagecalc.image_band_math
.. autofunction:: rsgislib.imagecalc.all_bands_equal_to
.. autofunction:: rsgislib.imagecalc.calc_band_range_thres_msk
.. autoclass:: rsgislib.imagecalc.BandDefn


Clustering
-----------

.. autofunction:: rsgislib.imagecalc.kmeans_clustering
.. autofunction:: rsgislib.imagecalc.isodata_clustering

Statistical Summary
---------------------

.. autofunction:: rsgislib.imagecalc.image_pixel_column_summary
.. autofunction:: rsgislib.imagecalc.calc_img_min_max
.. autofunction:: rsgislib.imagecalc.calc_img_mean
.. autofunction:: rsgislib.imagecalc.calc_img_stdev
.. autofunction:: rsgislib.imagecalc.calc_band_percentile
.. autofunction:: rsgislib.imagecalc.calc_band_percentile_msk
.. autofunction:: rsgislib.imagecalc.calc_imgs_pxl_percentiles
.. autofunction:: rsgislib.imagecalc.calc_img_band_pxl_percentiles
.. autofunction:: rsgislib.imagecalc.get_img_band_stats_in_env
.. autofunction:: rsgislib.imagecalc.get_img_band_mode_in_env
.. autofunction:: rsgislib.imagecalc.calc_prop_true_exp
.. autofunction:: rsgislib.imagecalc.calc_multi_img_band_stats
.. autofunction:: rsgislib.imagecalc.get_img_band_min_max
.. autofunction:: rsgislib.imagecalc.get_img_sum_stats_in_pxl
.. autofunction:: rsgislib.imagecalc.get_img_idx_for_stat
.. autofunction:: rsgislib.imagecalc.identify_min_pxl_value_in_win
.. autofunction:: rsgislib.imagecalc.calc_img_mean_in_mask
.. autofunction:: rsgislib.imagecalc.count_pxls_of_val
.. autofunction:: rsgislib.imagecalc.count_imgs_int_val_occur
.. autofunction:: rsgislib.imagecalc.get_unique_values
.. autofunction:: rsgislib.imagecalc.calc_imgs_pxl_mode
.. autofunction:: rsgislib.imagecalc.calc_img_basic_stats_for_ref_region
.. autofunction:: rsgislib.imagecalc.calc_sum_stats_msk_vals
.. autoclass:: rsgislib.imagecalc.StatsSummary


Update Pixel Values
--------------------

.. autofunction:: rsgislib.imagecalc.recode_int_raster
.. autofunction:: rsgislib.imagecalc.one_hot_category_encoding
.. autofunction:: rsgislib.imagecalc.calc_fill_regions_knn
.. autofunction:: rsgislib.imagecalc.create_categories_sgl_band

Statistics
-----------

.. autofunction:: rsgislib.imagecalc.image_pixel_linear_fit
.. autofunction:: rsgislib.imagecalc.pca
.. autofunction:: rsgislib.imagecalc.get_pca_eigen_vector
.. autofunction:: rsgislib.imagecalc.get_pca_eigen_vector_from_h5_data
.. autofunction:: rsgislib.imagecalc.perform_image_pca
.. autofunction:: rsgislib.imagecalc.perform_image_mnf
.. autofunction:: rsgislib.imagecalc.calculate_img_band_rmse
.. autofunction:: rsgislib.imagecalc.correlation_window
.. autofunction:: rsgislib.imagecalc.calc_img_correlation
.. autofunction:: rsgislib.imagecalc.calc_img_mutual_info
.. autofunction:: rsgislib.imagecalc.calc_img_earth_move_dist
.. autofunction:: rsgislib.imagecalc.calc_mask_img_pxl_val_prob
.. autofunction:: rsgislib.imagecalc.calc_img_difference
.. autofunction:: rsgislib.imagecalc.calc_area_under_curve

Thresholding
--------------

.. autofunction:: rsgislib.imagecalc.calc_split_win_thresholds
.. autofunction:: rsgislib.imagecalc.calc_apply_img_band_threshold

Histogram
------------

.. autofunction:: rsgislib.imagecalc.histogram
.. autofunction:: rsgislib.imagecalc.get_histogram
.. autofunction:: rsgislib.imagecalc.get_2d_img_histogram
.. autofunction:: rsgislib.imagecalc.calc_histograms_for_msk_vals



Normalise
----------

.. autofunction:: rsgislib.imagecalc.normalise_img_pxl_vals_py
.. autofunction:: rsgislib.imagecalc.normalise_image_band
.. autofunction:: rsgislib.imagecalc.calc_img_rescale
.. autofunction:: rsgislib.imagecalc.rescale_img_pxl_vals
.. autoclass:: rsgislib.imagecalc.ImageBandRescale

Geometry
---------

.. autofunction:: rsgislib.imagecalc.mahalanobis_dist_filter
.. autofunction:: rsgislib.imagecalc.mahalanobis_dist_to_img_filter
.. autofunction:: rsgislib.imagecalc.calc_dist_to_img_vals
.. autofunction:: rsgislib.imagecalc.calc_dist_to_img_vals_tiled
.. autofunction:: rsgislib.imagecalc.buffer_img_pxl_vals

Image Indices
-------------
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ndvi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_wbi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ndwi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_gndwi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_gmndwi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_whiteness
.. autofunction:: rsgislib.imagecalc.calcindices.calc_brightness
.. autofunction:: rsgislib.imagecalc.calcindices.calc_brightness_scaled
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ctvi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ndsi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_nbr
.. autofunction:: rsgislib.imagecalc.calcindices.calc_bai
.. autofunction:: rsgislib.imagecalc.calcindices.calc_mvi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_remi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_gndvi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_evi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_evi2
.. autofunction:: rsgislib.imagecalc.calcindices.calc_bsi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_si
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ndgi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ndmi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_npcri
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ndbsi
.. autofunction:: rsgislib.imagecalc.calcindices.calc_cmr
.. autofunction:: rsgislib.imagecalc.calcindices.calc_fmr
.. autofunction:: rsgislib.imagecalc.calcindices.calc_ior

Equalivance
-------------

.. autofunction:: rsgislib.imagecalc.are_imgs_equal
.. autofunction:: rsgislib.imagecalc.are_img_bands_equal


Least Cost Path
----------------

.. autofunction:: rsgislib.imagecalc.leastcostpath.perform_least_cost_path_calc

Calc Image Point Samples
-------------------------

.. autofunction:: rsgislib.imagecalc.calc_pt_win_smpls.calc_pt_smpl_img_vals
.. autoclass:: rsgislib.imagecalc.calc_pt_win_smpls.RSGISCalcSumVals


* :ref:`genindex`
* :ref:`modindex`
* :ref:`search`
