measure.h

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// Header file for the stimfit namespace
// Routines for measuring basic event properties
// last revision: 24-Jan-2011
// C. Schmidt-Hieber, christsc@gmx.de
 
// This program is free software; you can redistribute it and/or
// modify it under the terms of the GNU General Public License
// as published by the Free Software Foundation; either version 2
// of the License, or (at your option) any later version.
 
// This program is distributed in the hope that it will be useful,
// but WITHOUT ANY WARRANTY; without even the implied warranty of
// MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
// GNU General Public License for more details.
 
// You should have received a copy of the GNU General Public License
// along with this program; if not, write to the Free Software
// Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA  02110-1301, USA.

 
#ifndef _MEASLIB_H
#define _MEASLIB_H
 
#include <vector>
 
#include "stfnum.h"
#include "../libstfio/stfio.h"
 
namespace stfnum {



StfnumDll
double base(enum stfnum::baseline_method method, double& var, const std::vector<double>& data, std::size_t llb, std::size_t ulb);
 


StfnumDll
double peak( const std::vector<double>& data, double base, std::size_t llp, std::size_t ulp,
        int pM, stfnum::direction, double& maxT);
 

StfnumDll
double threshold( const std::vector<double>& data, std::size_t llp, std::size_t ulp, double slope, double& thrT, std::size_t windowLength );


StfnumDll
double risetime(const std::vector<double>& data, double base, double ampl,
                double left, double right, double frac, std::size_t& tLoId, std::size_t& tHiId,
                double& tLoReal);


StfnumDll
double risetime2(const std::vector<double>& data, double base, double ampl,
                double left, double right, double frac,
                double& innerTLoReal, double& innerTHiReal, double& outerTLoReal, double& outerTHiReal );


StfnumDll
double t_half( const std::vector<double>& data, double base, double ampl, double left, double right,
               double center, std::size_t& t50LeftId, std::size_t& t50RightId, double& t50LeftReal );


StfnumDll
double  maxRise( const std::vector<double>& data, double left, double right, double& maxRiseT,
                 double& maxRiseY, std::size_t windowLength);


StfnumDll
double  maxDecay( const std::vector<double>& data, double left, double right, double& maxDecayT,
                  double& maxDecayY, std::size_t windowLength);
 
#ifdef WITH_PSLOPE

double pslope( const std::vector<double>& data, std::size_t left, std::size_t right);
 
#endif
 
}
 
#endif